BINF 6203: Lab 6 — Browsers and tracks – Genome Intelligence
Use the UCSC Genome Browser to create a BED file with padded exons
Homer Software and Data Download
Big Data among Big Data: Genome Data
Handling peak files with bedtools | Introduction to ChIP-Seq using high-performance computing
AnnoMiner is a new web-tool to integrate epigenetics, transcription factor occupancy and transcriptomics data to predict transcriptional regulators | Scientific Reports
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File: [panel-id]-amplicon.bed – Mission Bio Support Center
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Working with BED Files | Ion AmpliSeq Designer
Simple bed - wubrowse wiki
Reference Genomes and Genomics File Formats
Handling peak files with bedtools | Introduction to ChIP-Seq using high-performance computing
genomecov — bedtools 2.31.0 documentation
Homer Software and Data Download
Converting gtf format to bed format
RSeQC: An RNA-seq Quality Control Package — RSeQC documentation
vcf2bed giving empty bed file as output
Handling peak files with bedtools | Introduction to ChIP-Seq using high-performance computing
Handling peak files with bedtools | Introduction to ChIP-Seq using high-performance computing
Bioinformatics101 - What is a BED file? - YouTube
DNASTAR - Working with BED files - YouTube
BINF 6203: Lab 6 — Browsers and tracks – Genome Intelligence
What is a BED file? | Varsomics
Working with BED Files | Ion AmpliSeq Designer
